| bootstrap |
a method for assessing the statistical significance the positions of branches in a phylogenetic tree that is inferred by a pairwise method (eg Neighbor-Joining or UPGMA). A bootstrap starts with a set of sequences in which every possible sequence pair has been aligned. For each aligned pair, it samples scores from random positions in the alignment, adding the scores. This is repeated until the pseudo-alignment is the same length as the real alignment. ...
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