| encephalitozoon cuniculi | A species of parasitic protozoa. This intracellular parasite is found in the brain, heart, and kidneys of several mammals. Transmission is probably by ingestion of the spores. (12 Dec 1998) |
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| Noguchia cuniculi | A species which causes conjunctival folliculosis in rabbits. (05 Mar 2000) |
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| encephalitozoon | A genus of parasitic protozoa originally considered a member of the class sporozoea but now recognised as part of the class microsporea. (12 Dec 1998) |
| Encephalitozoon hellum | A species of Encephalitozoon described from human ophthalmic infections causing punctate keratopathy and corneal ulceration in AIDS patients. (05 Mar 2000) |
| Treponema cuniculi | A species which causes spirochetosis in rabbits. (05 Mar 2000) |